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PapsAI Digital Microscope Slide Scanner

PapsAI leverages deep learning and digital microscopy to enable early, accurate, and scalable detection of cervical cancer

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About PapsAI

PapsAI is an integrated solution combining low-cost slide scanning technology with deep learning algorithms to detect cervical abnormalities from Pap smears and biopsy samples. It supports both light field and fluorescence imaging and is optimized for deployment in areas with limited healthcare infrastructure. Our Mission is to democratize access to cervical cancer screening through affordable, AI-powered diagnostic tools tailored for low-resource settings.

The Challenge

Cervical cancer is the leading cause of cancer-related death among women in Uganda and remains a major public health burden globally, with over 600,000 new cases and 340,000 deaths annually, 90% of which occur in low- and middle-income countries. Despite being preventable through early detection, access to effective screening remains limited. Pap smear, considered the gold standard and most widely used in resource-constrained settings, relies on manual microscopic analysis, which is time-consuming, subjective, and error-prone. This contributes to missed diagnoses and delayed care. Additionally, lack of affordable digital pathology makes it impossible to store or share images for telemedicine, clinical decision support, AI-assisted diagnosis, or follow-up. Existing digital pathology is expensive with limited uptake in low-resource environments, worsening disparities in cancer care.

PapsAI is the Solution

PapsAI is a low-cost, 3D-printed microscope slide scanner that digitizes Pap smears for AI-powered cervical cancer screening. It captures high-resolution images using a low-cost imaging system, supporting both brightfield and fluorescence modes. These are analyzed by AI to detect abnormal cells. Unlike expensive commercial scanners, PapsAI is affordable, portable, and locally manufacturable, ideal for low-resource settings. It enables digital archiving, remote consultation, decision support, and recurrence prediction. It features a motorized stage, objective lens, and webcam, with autofocusing via Fast Fourier Transform and GRBL-controlled precise movements as used in CNC machines.

PapsAI is modular, and battery-powered, operable without electricity and rechargeable via solar. It captures high-resolution images for rapid analysis using AI on a Raspberry Pi or connects to an online oncology information system for deeper, multimodal analysis. Its modular design allows standalone use for Pap smear digitisation or integration into broader cancer data systems. With more work in progress, we intend to develop PocketPapsAI, which will be developed for home-based screening of cervical cancer.

Our Use Cases

Clinical Diagnosis in district hospitals and health centers

Mobile Screening Units in rural areas

Medical Training with annotated images

Research & Public Health Surveillance

Our Key Features

AI-powered classification (2-class, 3-class, or 5-class)

Fluorescence and light microscopy support

Offline deployment on Raspberry Pi or edge devices

Integration with health information systems

Discover the Passion Behind Our Purpose

Our Mission is to democratize access to cervical cancer screening through affordable, AI-powered diagnostic tools tailored for low-resource settings.

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Technology

3D printing

PapsAI consists of 70% 3D printed components. This makes it easy to replicate and locally manufacture

Deep Learning Mode

CervixNet (CNN-based) for automated diagnosis and classification of cervical cancer from pap-smears

Imaging

Light field and fluorescence microscopy to visualize and provide information about cellular components.

Platforms

Edge devices, Raspberry Pi, and Android-based apps, Stepper motors, GRBL library, Limit switch sensors

Programming

Python, TensorFlow, OpenCV, Flask/FastAPI backend, Django

Telemedicine

Real time collaboration among pathologists to support multiple diagnosis from different experts.

Our Partners

Our Media

Publications

1. J. Zhang et al., “Moving towards vertically integrated artificial intelligence development,” npj Digit. Med., 2022, doi: 10.1038/s41746-022-00690-x.

2. W. William, A. Ware, A. H. Basaza-Ejiri, and J. Obungoloch, “Cervical cancer classification from Pap-smears using an enhanced fuzzy C-means algorithm,” Informatics Med. Unlocked, 2019, doi: 10.1016/j.imu.2019.02.001.

3. W. William, A. Ware, A. H. Basaza-Ejiri, and J. Obungoloch, “A pap-smear analysis tool (PAT) for detection of cervical cancer from pap-smear images,” Biomed. Eng. Online.

4. W. William, A. Ware, A. H. Basaza-Ejiri, and J. Obungoloch, “A review of image analysis and machine learning techniques for automated cervical cancer screening from pap-smear images,” Comput. Methods Programs Biomed., vol. 164, pp. 15–22, Oct. 2018, doi: 10.1016/J.CMPB.2018.05.034.

5. W. William, A. Ware, A. H. Basaza-Ejiri, and J. Obungoloch, “Automated Diagnosis and Classification of Cervical Cancer from pap-smear Images,” in 2019 IST-Africa Week Conference, IST-Africa 2019, 2019. doi: 10.23919/ISTAFRICA.2019.8764887.

6. Wasswa William, Annabella Habinka Basaza-Ejiri, Johnes Obungoloch, and Andrew Ware, “A Review of Applications of Image Analysis and Machine Learning Techniques in Automated Diagnosis and Classification of Cervical Cancer from Pap-smear Images,” in 2018 IST-Africa Week Conference (IST-Africa), 2018.

7. W. Wasswa, J. Obungoloch, A. H. Basaza-Ejiri, and A. Ware, “Automated Segmentation of Nucleus, Cytoplasm and Background of Cervical Cells from Pap-smear Images using a Trainable Pixel Level Classifier,” in Proceedings - Applied Imagery Pattern Recognition Workshop, 2019. doi: 10.1109/AIPR47015.2019.9174599.

8. W. Wasswa, “Automated innovation and impact,” Science (80-. )., vol. 384, no. 6691, p. 42, 2024.

9. M. A. Rahmoon, G. L. Simegn, W. William, and M. A. Reiche, “Unveiling the vision: exploring the potential of image analysis in Africa,” Nature Methods. 2023. doi: 10.1038/s41592-023-01907-x.

10. J. E. Alderman et al., “Tackling algorithmic bias and promoting transparency in health datasets: the STANDING Together consensus recommendations,” Lancet Digit. Heal., vol. 7, no. 1, pp. e64–e88, Jan. 2025, doi: 10.1016/S2589-7500(24)00224-3.

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Our Address

Mbarara, Uganda

Email Us

info.papsai@gmail.com


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